| 02/06/2007 | 13:00 | Dynamo Dresden | - | Hamburger SV II | 2:4 (2:0) | |
| 13:00 | Rot-Weiß Erfurt | - | Holstein Kiel | 0:1 (0:1) | ||
| 13:00 | 1. FC Magdeburg | - | FC St. Pauli | 1:1 (0:0) | ||
| 13:00 | Borussia Dortmund II | - | Bayer Leverkusen II | 2:0 (1:0) | ||
| 13:00 | Wuppertaler SV | - | Kickers Emden | 2:4 (1:0) | ||
| 13:00 | Fortuna Düsseldorf | - | Bor. Mönchengladbach II | 4:1 (3:1) | ||
| 13:00 | VfB Lübeck | - | SV Wilhelmshaven | 6:0 (3:0) | ||
| 13:00 | Werder Bremen II | - | 1. FC Union Berlin | 3:2 (2:2) | ||
| 13:00 | VfL Osnabrück | - | Rot Weiss Ahlen | 2:1 (0:1) |
| » Tables | First round | Second round |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FC St. Pauli | 36 | 17 | 12 | 7 | 52:32 | 20 | 63 |
| 2 |
|
VfL Osnabrück | 36 | 17 | 10 | 9 | 59:43 | 16 | 61 |
| 3 |
|
1. FC Magdeburg | 36 | 16 | 12 | 8 | 52:41 | 11 | 60 |
| 4 |
|
Kickers Emden | 36 | 16 | 11 | 9 | 50:41 | 9 | 59 |
| 5 |
|
Wuppertaler SV | 36 | 16 | 9 | 11 | 59:49 | 10 | 57 |
| 6 |
|
Hamburger SV II | 36 | 15 | 11 | 10 | 56:46 | 10 | 56 |
| 7 |
|
Dynamo Dresden | 36 | 16 | 7 | 13 | 54:45 | 9 | 55 |
| 8 |
|
Werder Bremen II | 36 | 15 | 7 | 14 | 53:47 | 6 | 52 |
| 9 |
|
VfB Lübeck | 36 | 15 | 6 | 15 | 53:43 | 10 | 51 |
| 10 |
|
Fortuna Düsseldorf | 36 | 13 | 12 | 11 | 50:47 | 3 | 51 |
| 11 |
|
Rot-Weiß Erfurt | 36 | 13 | 11 | 12 | 41:44 | -3 | 50 |
| 12 |
|
1. FC Union Berlin | 36 | 13 | 9 | 14 | 45:39 | 6 | 48 |
| 13 |
|
Rot Weiss Ahlen | 36 | 13 | 9 | 14 | 48:52 | -4 | 48 |
| 14 |
|
Borussia Dortmund II | 36 | 14 | 6 | 16 | 42:47 | -5 | 48 |
| 15 |
|
Holstein Kiel | 36 | 13 | 9 | 14 | 42:52 | -10 | 48 |
| 16 |
|
Bor. Mönchengladbach II | 36 | 9 | 8 | 19 | 45:62 | -17 | 35 |
| 17 |
|
Bayer Leverkusen II | 36 | 8 | 10 | 18 | 40:58 | -18 | 34 |
| 18 |
|
Hertha BSC II | 36 | 8 | 8 | 20 | 31:55 | -24 | 32 |
| 19 |
|
SV Wilhelmshaven | 36 | 7 | 9 | 20 | 40:69 | -29 | 30 |